# Makefile.in generated by automake 1.6.1 from Makefile.am.
# emboss/acd/Makefile.  Generated from Makefile.in by configure.

# Copyright 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002
# Free Software Foundation, Inc.
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.

# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY, to the extent permitted by law; without
# even the implied warranty of MERCHANTABILITY or FITNESS FOR A
# PARTICULAR PURPOSE.


SHELL = /bin/sh

srcdir = .
top_srcdir = ../..

prefix = /usr/local
exec_prefix = ${prefix}

bindir = ${exec_prefix}/bin
sbindir = ${exec_prefix}/sbin
libexecdir = ${exec_prefix}/libexec
datadir = ${prefix}/share
sysconfdir = ${prefix}/etc
sharedstatedir = ${prefix}/com
localstatedir = ${prefix}/var
libdir = ${exec_prefix}/lib
infodir = ${prefix}/info
mandir = ${prefix}/man
includedir = ${prefix}/include
oldincludedir = /usr/include
pkglibdir = $(libdir)/EMBOSS
pkgincludedir = $(includedir)/EMBOSS
top_builddir = ../..

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PRE_INSTALL = :
POST_INSTALL = :
NORMAL_UNINSTALL = :
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host_alias = 
host_triplet = i686-pc-linux-gnu

EXEEXT = 
OBJEXT = o
PATH_SEPARATOR = :

pkgdatadir = $(prefix)/share/$(PACKAGE)/acd
AJAX_FIXED_ROOT = \"/m2/emboss/emboss/emboss\"
AMTAR = ${SHELL} /m2/emboss/emboss/missing --run tar
AS = @AS@
AWK = gawk
CC = gcc
CPP = gcc -E
DEPDIR = .deps
DLLTOOL = @DLLTOOL@
ECHO = echo
EMBOSS_TOP = /m2/emboss/emboss
INSTALL_STRIP_PROGRAM = ${SHELL} $(install_sh) -c -s
ISAIXIA64 = 
JAVA_OK = 
LIBTOOL = $(SHELL) $(top_builddir)/libtool
LN_S = ln -s
NEEDAJAX = 
OBJDUMP = @OBJDUMP@
PACKAGE = EMBOSS
RANLIB = ranlib
STRIP = strip
VERSION = 2.4.1
XLIB =  -L/usr/X11R6/lib -L/usr/X11R6/lib -lX11 
X_CFLAGS =  -I/usr/X11R6/include -I/usr/X11R6/include
X_EXTRA_LIBS = 
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am__include = include
am__quote = 
havejavac = 
install_sh = /m2/emboss/emboss/install-sh

pkgdata_DATA = codes.english \
	abiview.acd ajbad.acd ajfeatest.acd ajtest.acd alignwrap.acd \
	antigenic.acd backtranseq.acd banana.acd biosed.acd \
	btwisted.acd cai.acd chaos.acd charge.acd checktrans.acd chips.acd \
	cirdna.acd codcmp.acd coderet.acd \
	complex.acd compseq.acd cons.acd contacts.acd corbatest.acd \
	cpgplot.acd cpgreport.acd cusp.acd cutgextract.acd cutseq.acd \
	dan.acd dbiblast.acd dbifasta.acd dbiflat.acd \
	dbigcg.acd degapseq.acd \
	demoalign.acd demofeatures.acd demolist.acd \
	demoreport.acd demosequence.acd \
	demostring.acd demotable.acd \
	descseq.acd dichet.acd diffseq.acd \
	digest.acd distmat.acd domainer.acd \
	dotmatcher.acd dotpath.acd dottup.acd \
	dreg.acd einverted.acd embossdata.acd embossversion.acd emma.acd \
	emowse.acd entrails.acd entret.acd eprimer3.acd equicktandem.acd \
	est2genome.acd etandem.acd extractseq.acd extractfeat.acd findkm.acd \
	freak.acd fuzznuc.acd fuzzpro.acd fuzztran.acd \
	garnier.acd geecee.acd getorf.acd helixturnhelix.acd hmoment.acd \
	histogramtest.acd iep.acd infoalign.acd infoseq.acd isochore.acd \
	interface.acd lindna.acd listor.acd \
        marscan.acd maskfeat.acd maskseq.acd \
	matcher.acd swissparse.acd

pkgdata2_DATA = megamerger.acd merger.acd msbar.acd \
	mwfilter.acd needle.acd \
	newcpgreport.acd newcpgseek.acd newseq.acd noreturn.acd \
	notseq.acd nrscope.acd nthseq.acd octanol.acd oddcomp.acd \
	palindrome.acd pasteseq.acd patmatdb.acd patmatmotifs.acd \
	patmattest.acd pdbtosp.acd pepcoil.acd pepinfo.acd pepnet.acd \
	pepstats.acd pepwheel.acd pepwindow.acd pepwindowall.acd \
	plotcon.acd plotorf.acd polydot.acd \
	preg.acd prettyplot.acd prettyseq.acd prima.acd \
	primers.acd primersearch.acd printsextract.acd profit.acd \
	prophecy.acd prophet.acd prosextract.acd pscan.acd psiblasts.acd \
	rebaseextract.acd recoder.acd redata.acd remap.acd \
	restover.acd restrict.acd revseq.acd \
	scopalign.acd scope.acd scopparse.acd seealso.acd \
	seqinfo.acd seqmatchall.acd seqnr.acd seqret.acd seqretall.acd \
	seqretallfeat.acd seqretset.acd seqretsingle.acd \
	seqretsplit.acd seqsort.acd showalign.acd\
	showdb.acd showfeat.acd showorf.acd showseq.acd shuffleseq.acd \
	sigcleave.acd siggen.acd sigscan.acd silent.acd splitter.acd \
	stretcher.acd stssearch.acd supermatcher.acd syco.acd \
	testplot.acd textsearch.acd tfextract.acd tfm.acd \
	tfscan.acd tmap.acd tranalign.acd transeq.acd treetypedisplay.acd \
	trimest.acd trimseq.acd union.acd vectorstrip.acd water.acd whichdb.acd \
	wobble.acd wordcount.acd wordmatch.acd wossname.acd yank.acd

pkgdata2dir = $(prefix)/share/$(PACKAGE)/acd
subdir = emboss/acd
mkinstalldirs = $(SHELL) $(top_srcdir)/mkinstalldirs
CONFIG_CLEAN_FILES =
DIST_SOURCES =
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mostlyclean-libtool:
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# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
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