Installation.

1) Go to the emboss directory 
cd EMBOSS-0.0.4

2) make new directory embassy if it does not exist already.
mkdir embassy

3) Go into that directory
cd embassy

4) unzip and untar the file
gunzip MSE-0.0.4.tar.gz
tar xvf MSE-0.0.4.tar

5) go into the mse directory
cd MSE-0.0.4

6) configure and compile
./configure (use same options as you used to compile emboss)
make
make install

