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sc::IntCoorGen Member List

This is the complete list of members for sc::IntCoorGen, including all inherited members.
add_bends(const Ref< SetIntCoor > &list, BitArrayLTri &bonds, Molecule &m) (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
add_bonds(const Ref< SetIntCoor > &list, BitArrayLTri &bonds, Molecule &m) (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
add_out(const Ref< SetIntCoor > &list, BitArrayLTri &bonds, Molecule &m) (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
add_tors(const Ref< SetIntCoor > &list, BitArrayLTri &bonds, Molecule &m) (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
class_desc() constsc::DescribedClass
class_name() constsc::DescribedClass
class_version() constsc::DescribedClass
cos_ijk(Molecule &m, int i, int j, int k) (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
dereference()sc::RefCount [inline]
DescribedClass() (defined in sc::DescribedClass)sc::DescribedClass
DescribedClass(const DescribedClass &) (defined in sc::DescribedClass)sc::DescribedClass
dir_restore_state(StateIn &si, const char *objectname, const char *keyword=0) (defined in sc::SavableState)sc::SavableState [static]
extra_bonds_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
generate(const Ref< SetIntCoor > &)sc::IntCoorGen [virtual]
hterminal(Molecule &m, BitArrayLTri &bonds, int i) (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
identifier()sc::Identity [inline]
init_constants() (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
IntCoorGen(const Ref< Molecule > &, int nextra=0, int *extra=0)sc::IntCoorGen
IntCoorGen(const Ref< KeyVal > &)sc::IntCoorGen
IntCoorGen(StateIn &) (defined in sc::IntCoorGen)sc::IntCoorGen
key_restore_state(StateIn &si, const char *keyword)sc::SavableState [static]
linear_bend_thres_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
linear_bends_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
linear_lbends_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
linear_stors_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
linear_tors_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
linear_tors_thres_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
lock_ptr() constsc::RefCount
managed() const (defined in sc::RefCount)sc::RefCount [inline]
managed() constsc::RefCount [inline]
molecule_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
nearest_contact(int i, Molecule &m) (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
nextra_bonds_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
nreference() constsc::RefCount [inline]
operator=(const SavableState &) (defined in sc::SavableState)sc::SavableState
operator=(const DescribedClass &) (defined in sc::DescribedClass)sc::DescribedClass
operator=(const RefCount &) (defined in sc::RefCount)sc::RefCount [inline, protected]
print(std::ostream &out=ExEnv::out0()) constsc::IntCoorGen [virtual]
radius_scale_factor_ (defined in sc::IntCoorGen)sc::IntCoorGen [protected]
RefCount() (defined in sc::RefCount)sc::RefCount [inline, protected]
RefCount(const RefCount &) (defined in sc::RefCount)sc::RefCount [inline, protected]
reference()sc::RefCount [inline]
restore_state(StateIn &si)sc::SavableState [static]
SavableState() (defined in sc::SavableState)sc::SavableState [protected]
SavableState(const SavableState &) (defined in sc::SavableState)sc::SavableState [protected]
SavableState(StateIn &)sc::SavableState [protected]
save_data_state(StateOut &)sc::IntCoorGen [virtual]
save_object_state(StateOut &)sc::SavableState
save_state(StateOut &)sc::SavableState
save_state(SavableState *s, StateOut &) (defined in sc::SavableState)sc::SavableState [static]
save_vbase_state(StateOut &)sc::SavableState [virtual]
unlock_ptr() constsc::RefCount
unmanage()sc::RefCount [inline]
use_locks(bool inVal)sc::RefCount
~DescribedClass() (defined in sc::DescribedClass)sc::DescribedClass [virtual]
~Identity() (defined in sc::Identity)sc::Identity [virtual]
~IntCoorGen() (defined in sc::IntCoorGen)sc::IntCoorGen
~RefCount() (defined in sc::RefCount)sc::RefCount [virtual]
~SavableState() (defined in sc::SavableState)sc::SavableState [virtual]

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