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gnBaseSource Member List This is the complete list of members for gnBaseSource, including all inherited members. Clone() const=0 [pure virtual] Close()=0 [pure virtual] GetContigID(const string &name) const=0 [pure virtual] GetContigListLength() const=0 [pure virtual] GetContigName(const uint32 i) const=0 [pure virtual] GetContigSeqLength(const uint32 i) const=0 [pure virtual] GetFilter() const=0 [pure virtual] GetOpenString() const=0 [pure virtual] GetSpec() const=0 [pure virtual] gnBaseSource() [inline] gnClone() [inline] HasContig(const string &name) const=0 [pure virtual] Open(string openString)=0 [pure virtual] Open()=0 [pure virtual] Read(const uint64 pos, char *buf, uint32 &len)=0 [pure virtual] SeqRead(const gnSeqI start, char *buf, uint32 &bufLen, const uint32 contigI=ALL_CONTIGS)=0 [pure virtual] SetFilter(gnFilter *filter)=0 [pure virtual] ~gnBaseSource() [inline, virtual] ~gnClone() [inline, virtual]