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testTests.cpp File Reference

#include "gn/gnSequence.h"
#include "gn/gnGBKSource.h"
#include "gn/gnFASSource.h"
#include <algorithm>

Go to the source code of this file.

Functions

boolean LocationLessthan (const gnLocation &a, const gnLocation &b)

boolean LocationEndLessthan (const gnLocation &a, const gnLocation &b)

boolean LocationSizeLessthan (const gnLocation &a, const gnLocation &b)

void ComplementLocation (vector< gnLocation > &l_list)

void DeleteRepeats (list< gnLocation > &loc_list)

void WriteData (gnSequence &file_sequence, list< gnLocation > &loc_list, string &filename)

void WriteList (list< gnLocation > &loc_list, string &filename)

void print_usage (char *pname)

int main (int argc, char *argv[])

Function Documentation

void ComplementLocation ( vector< gnLocation > & l_list )

Definition at line 26 of file testTests.cpp.
Referenced by main().

void DeleteRepeats ( list< gnLocation > & loc_list )

Definition at line 52 of file testTests.cpp.
Referenced by main().

boolean LocationEndLessthan ( const gnLocation & a,

const gnLocation & b ) [static]

Definition at line 14 of file testTests.cpp.
Referenced by DeleteRepeats().

boolean LocationLessthan ( const gnLocation & a,

const gnLocation & b ) [static]

Definition at line 8 of file testTests.cpp.

boolean LocationSizeLessthan ( const gnLocation & a,

const gnLocation & b ) [static]

Definition at line 20 of file testTests.cpp.

void WriteData ( gnSequence & file_sequence,

list< gnLocation > & loc_list,

string & filename )

Definition at line 73 of file testTests.cpp.
Referenced by main().

void WriteList ( list< gnLocation > & loc_list,

string & filename )

Definition at line 91 of file testTests.cpp.
Referenced by main().

int main ( int argc,

char * argv[] )

Definition at line 104 of file testTests.cpp.

void print_usage ( char * pname )

Definition at line 100 of file testTests.cpp.
Referenced by main().

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